How to disable pop ups in windows 7?

Is there any drivers or software tools from Microsoft or any other sites which can disable all pop up permanently? My application runs by default immediately after system login and displays graphically various information being received serially from the test setup. The user don’t have a keyboard or a mouse to control any thing. It is simply a read only monitor. Why do some times pop up comes related to display issues?
The user had only option to restart when pop up comes as he cannot close the pop up. I am working on Windows embedded 7 operating system
